Serveur d'exploration sur l'oranger

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rpl KAJL- rpo BC operon

Identifieur interne : 000239 ( France/Analysis ); précédent : 000238; suivant : 000240

Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rpl KAJL- rpo BC operon

Auteurs : Pascale Planet [France] ; Sandrine Jagoueix [France] ; M. Bové [France] ; Monique Garnier [France]

Source :

RBID : ISTEX:F361D224F83325C1CBF99750EB2A6A96050B8732

Abstract

Abstract: Greening disease of citrus is caused by a phloem-restricted, uncultured bacterium, recently characterized and named Liberobacter. As shown previously, a probe encoding ribosomal protein genes (rplKAJL-rpoBC operon) from an Asian liberobacter could detect all Asian liberobacter strains tested, but not African strains. Using the sequence of the rplKAJL-rpoBC operon of the Asian liberobacter strain from Poona (India), we have defined primers for PCR amplification of the equivalent genes of an African liberobacter strain. The amplified fragment was cloned in pUC18 and successfully used as a probe to detect African liberobacter strains by Southern and dot hybridizations. Sequence comparisons of the African and Asian liberobacter operons indicate that they represent two different species in the proposed genus Liberobacter.

Url:
DOI: 10.1007/BF00296198


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

ISTEX:F361D224F83325C1CBF99750EB2A6A96050B8732

Le document en format XML

<record>
<TEI wicri:istexFullTextTei="biblStruct">
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rpl KAJL- rpo BC operon</title>
<author>
<name sortKey="Planet, Pascale" sort="Planet, Pascale" uniqKey="Planet P" first="Pascale" last="Planet">Pascale Planet</name>
</author>
<author>
<name sortKey="Jagoueix, Sandrine" sort="Jagoueix, Sandrine" uniqKey="Jagoueix S" first="Sandrine" last="Jagoueix">Sandrine Jagoueix</name>
</author>
<author>
<name sortKey="Bove, M" sort="Bove, M" uniqKey="Bove M" first="M." last="Bové">M. Bové</name>
</author>
<author>
<name sortKey="Garnier, Monique" sort="Garnier, Monique" uniqKey="Garnier M" first="Monique" last="Garnier">Monique Garnier</name>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">ISTEX</idno>
<idno type="RBID">ISTEX:F361D224F83325C1CBF99750EB2A6A96050B8732</idno>
<date when="1995" year="1995">1995</date>
<idno type="doi">10.1007/BF00296198</idno>
<idno type="url">https://api.istex.fr/document/F361D224F83325C1CBF99750EB2A6A96050B8732/fulltext/pdf</idno>
<idno type="wicri:Area/Istex/Corpus">001164</idno>
<idno type="wicri:Area/Istex/Curation">001164</idno>
<idno type="wicri:Area/Istex/Checkpoint">000E96</idno>
<idno type="wicri:doubleKey">0343-8651:1995:Planet P:detection:and:characterization</idno>
<idno type="wicri:Area/Main/Merge">003856</idno>
<idno type="wicri:Area/Main/Curation">003589</idno>
<idno type="wicri:Area/Main/Exploration">003589</idno>
<idno type="wicri:Area/France/Extraction">000239</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title level="a" type="main" xml:lang="en">Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rpl KAJL- rpo BC operon</title>
<author>
<name sortKey="Planet, Pascale" sort="Planet, Pascale" uniqKey="Planet P" first="Pascale" last="Planet">Pascale Planet</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire de Biologie Cellulaire et Moléculaire, INRA, Université de Bordeaux II, BP 81, 33883, Villenave d'Ornon Cedex</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Jagoueix, Sandrine" sort="Jagoueix, Sandrine" uniqKey="Jagoueix S" first="Sandrine" last="Jagoueix">Sandrine Jagoueix</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire de Biologie Cellulaire et Moléculaire, INRA, Université de Bordeaux II, BP 81, 33883, Villenave d'Ornon Cedex</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Bove, M" sort="Bove, M" uniqKey="Bove M" first="M." last="Bové">M. Bové</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire de Biologie Cellulaire et Moléculaire, INRA, Université de Bordeaux II, BP 81, 33883, Villenave d'Ornon Cedex</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Garnier, Monique" sort="Garnier, Monique" uniqKey="Garnier M" first="Monique" last="Garnier">Monique Garnier</name>
<affiliation wicri:level="3">
<country xml:lang="fr">France</country>
<wicri:regionArea>Laboratoire de Biologie Cellulaire et Moléculaire, INRA, Université de Bordeaux II, BP 81, 33883, Villenave d'Ornon Cedex</wicri:regionArea>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
</analytic>
<monogr></monogr>
<series>
<title level="j">Current Microbiology</title>
<title level="j" type="sub">An International Journal</title>
<title level="j" type="abbrev">Current Microbiology</title>
<idno type="ISSN">0343-8651</idno>
<idno type="eISSN">1432-0991</idno>
<imprint>
<publisher>Springer-Verlag</publisher>
<pubPlace>New York</pubPlace>
<date type="published" when="1995-03-01">1995-03-01</date>
<biblScope unit="volume">30</biblScope>
<biblScope unit="issue">3</biblScope>
<biblScope unit="page" from="137">137</biblScope>
<biblScope unit="page" to="141">141</biblScope>
</imprint>
<idno type="ISSN">0343-8651</idno>
</series>
<idno type="istex">F361D224F83325C1CBF99750EB2A6A96050B8732</idno>
<idno type="DOI">10.1007/BF00296198</idno>
<idno type="ArticleID">BF00296198</idno>
<idno type="ArticleID">Art4</idno>
</biblStruct>
</sourceDesc>
<seriesStmt>
<idno type="ISSN">0343-8651</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass></textClass>
<langUsage>
<language ident="en">en</language>
</langUsage>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Abstract: Greening disease of citrus is caused by a phloem-restricted, uncultured bacterium, recently characterized and named Liberobacter. As shown previously, a probe encoding ribosomal protein genes (rplKAJL-rpoBC operon) from an Asian liberobacter could detect all Asian liberobacter strains tested, but not African strains. Using the sequence of the rplKAJL-rpoBC operon of the Asian liberobacter strain from Poona (India), we have defined primers for PCR amplification of the equivalent genes of an African liberobacter strain. The amplified fragment was cloned in pUC18 and successfully used as a probe to detect African liberobacter strains by Southern and dot hybridizations. Sequence comparisons of the African and Asian liberobacter operons indicate that they represent two different species in the proposed genus Liberobacter.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
<region>
<li>Aquitaine</li>
<li>Nouvelle-Aquitaine</li>
</region>
<settlement>
<li>Villenave d'Ornon</li>
</settlement>
</list>
<tree>
<country name="France">
<region name="Nouvelle-Aquitaine">
<name sortKey="Planet, Pascale" sort="Planet, Pascale" uniqKey="Planet P" first="Pascale" last="Planet">Pascale Planet</name>
</region>
<name sortKey="Bove, M" sort="Bove, M" uniqKey="Bove M" first="M." last="Bové">M. Bové</name>
<name sortKey="Garnier, Monique" sort="Garnier, Monique" uniqKey="Garnier M" first="Monique" last="Garnier">Monique Garnier</name>
<name sortKey="Jagoueix, Sandrine" sort="Jagoueix, Sandrine" uniqKey="Jagoueix S" first="Sandrine" last="Jagoueix">Sandrine Jagoueix</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000239 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000239 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Bois
   |area=    OrangerV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     ISTEX:F361D224F83325C1CBF99750EB2A6A96050B8732
   |texte=   Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rpl KAJL- rpo BC operon
}}

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Sat Dec 3 17:11:04 2016. Site generation: Wed Mar 6 18:18:32 2024